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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78935801_78937186_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78935801 - 78937186

Intron Length:

1386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAAAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTATTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGGTGTTTATTT

Flanking Amino Acid:

GTWSFVEMLVRSCLYCKIVC

Intron Amino Acid Position:

377

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

79.3

28.7

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

87.4

0.84

0.8

84.8

35.4

Minor 5ss

32.1

-2

39.7

45.8

Minor BPS

49.1

0.01

67.82

43.9

Associated Gene:

Gene:

SLF1

Ensembl Gene ID:

ENSAPLG00000004056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028901

78915759 - 78951898

36140

ENSAPLT00000004155

78915759 - 78952066

36308