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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78941884_78943843_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78941884 - 78943843

Intron Length:

1960

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TGTTCCTTTCTT

Flanking Amino Acid:

AVLKHMYFVESAKHKSAHKD

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.4

1.12

0.6

90.5

20.4

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

-1.6

2.7

44.9

43.2

Minor BPS

46.2

-0.2

3.6

80.7

41.2

Associated Gene:

Gene:

SLF1

Ensembl Gene ID:

ENSAPLG00000004056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028901

78915759 - 78951898

36140

ENSAPLT00000004155

78915759 - 78952066

36308