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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_78948881_78951368_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

78948881 - 78951368

Intron Length:

2488

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

ATTTGCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGTTCAT

U12 Branch Point Sequence:

TTGTGGTTGACA

Flanking Amino Acid:

SEKFLAACAAGKWILTKEYI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.7

83.2

30.8

Major BPS

0.65

1.1

77.4

37.3

Major PPT

80.6

0.69

0.8

78.2

35.7

Minor 5ss

29.7

-2.3

2.6

33.7

41.6

Minor BPS

49.3

-0

2.5

69.88

42.9

Associated Gene:

Gene:

SLF1

Ensembl Gene ID:

ENSAPLG00000004056

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028901

78915759 - 78951898

36140

ENSAPLT00000004155

78915759 - 78952066

36308