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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_79030408_79038544_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79030408 - 79038544

Intron Length:

8137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATGAAA

5'SS Class:

strong_major

3'SS Sequence:

TCATACTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATCAT

U12 Branch Point Sequence:

TTAATCTTAACT

Flanking Amino Acid:

PLLTKNKNVQGVLKKASGEL

Intron Amino Acid Position:

380

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

76.8

33.4

Major BPS

88.2

0.95

0.9

88.3

28.5

Major PPT

71.3

0.48

65.5

40.5

Minor 5ss

31.6

-2.1

3.1

39.6

45.9

Minor BPS

79.7

1.01

1.1

89.56

34.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003907

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004003

78962807 - 79190527

227721