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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_7905410_8034271_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7905410 - 8034271

Intron Length:

128862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTAAC

U12 Branch Point Sequence:

TTTTTCCTATTT

Flanking Amino Acid:

KNTQVKDSDQVYDRPQKHSA

Intron Amino Acid Position:

193

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

1.3

74.1

38.3

Major BPS

0.45

0.9

67.6

25.3

Major PPT

79.3

0.66

0.9

70.1

40.1

Minor 5ss

28.9

-2.4

2.6

32.6

Minor BPS

60.1

0.4

1.9

84.08

Associated Gene:

Gene:

SETBP1

Ensembl Gene ID:

ENSAPLG00000017129

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025657

7827766 - 8074580

246815