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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_79060374_79065904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79060374 - 79065904

Intron Length:

5531

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTAAC

5'SS Class:

strong_major

3'SS Sequence:

TGCATTTTGAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

CTGTCTTTATCT

Flanking Amino Acid:

CIPSSFPSLMKSPSAGEMAA

Intron Amino Acid Position:

788

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.77

0.9

80.3

26.9

Major BPS

83.9

0.84

73.9

41.3

Major PPT

60.4

0.23

1.2

62.5

42.3

Minor 5ss

32.3

-2

2.7

33.9

Minor BPS

66.6

0.6

1.6

79.17

43.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003907

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004003

78962807 - 79190527

227721