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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_79076494_79078374_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79076494 - 79078374

Intron Length:

1881

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGGGTGAC

5'SS Class:

major

3'SS Sequence:

TCTTTTTTTTAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

TTAATGTTAATC

Flanking Amino Acid:

REMKRKESGKCFTRLAAQAV

Intron Amino Acid Position:

976

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.1

64.8

35.2

Major BPS

80.4

0.76

80.3

31.8

Major PPT

84.6

0.78

0.9

90.3

22.8

Minor 5ss

28.6

-2.5

3.4

37.9

40.8

Minor BPS

53.3

0.08

2.1

67.33

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003907

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004003

78962807 - 79190527

227721