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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_79091370_79190412_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79091370 - 79190412

Intron Length:

99043

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

ATAACGTTAATT

Flanking Amino Acid:

QMTFRVLLAHRWEMKEGADL

Intron Amino Acid Position:

1248

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.2

Major BPS

73.8

0.59

0.9

26.8

Major PPT

90.4

0.91

0.6

88.5

Minor 5ss

28.6

-2.5

3.5

46.8

Minor BPS

57.7

0.32

2.1

76.15

40.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003907

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004003

78962807 - 79190527

227721