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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_79206694_79222725_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

79206694 - 79222725

Intron Length:

16032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGCTT

5'SS Class:

major

3'SS Sequence:

TGTTGATTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

AATTTGTTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.1

42.6

Major BPS

84.4

0.85

34.5

Major PPT

81.4

0.71

0.9

77.7

40.6

Minor 5ss

42.8

-0.8

3.4

46.3

Minor BPS

61.4

0.44

78.94

37.5

Associated Gene:

Gene:

FAM172A

Ensembl Gene ID:

ENSAPLG00000004055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004180

79206564 - 79452504

245941