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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_79226276_79228962_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79226276 - 79228962

Intron Length:

2687

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

GTTTCCTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAA

U12 Branch Point Sequence:

ATACTCTAAAAT

Flanking Amino Acid:

LEGFEYIFNEKGQLRHAKTG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.9

81.6

33.2

Major BPS

0.57

73.6

28.6

Major PPT

86.6

0.82

0.8

80.9

Minor 5ss

43.6

-0.7

2.9

58.5

40.3

Minor BPS

51.7

0.13

1.7

69.9

40.5

Associated Gene:

Gene:

FAM172A

Ensembl Gene ID:

ENSAPLG00000004055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004180

79206564 - 79452504

245941