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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_79254076_79261451_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79254076 - 79261451

Intron Length:

7376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGTATA

5'SS Class:

strong_major

3'SS Sequence:

GCTGTAATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTGCTGTAATT

Flanking Amino Acid:

ECHLKKVTLPVDATESEPKS

Intron Amino Acid Position:

126

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

87.5

28.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

70.9

0.47

62.9

42.1

Minor 5ss

39.8

-1.1

2.8

52.2

44.4

Minor BPS

55.8

0.26

2.1

77.48

Associated Gene:

Gene:

FAM172A

Ensembl Gene ID:

ENSAPLG00000004055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004180

79206564 - 79452504

245941