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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_793259_793339_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

793259 - 793339

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGCTGAC

U12 Branch Point Sequence:

ACTGGCTGACCC

Flanking Amino Acid:

VAATHLKALPRTQILP*

Intron Amino Acid Position:

541

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

77.7

30.1

Major BPS

49.4

-0

1.3

42.8

41.8

Major PPT

89.4

0.89

0.6

84.8

22.8

Minor 5ss

31.6

-2.1

3.2

41.8

38.8

Minor BPS

-0.5

2.1

52.95

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041265

793239 - 806728

13490

ENSAPLT00000019602

793239 - 807875

14637

ENSAPLT00000005506

793239 - 817430

24192