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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_79353135_79386157_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79353135 - 79386157

Intron Length:

33023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TATTTTTTAACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAA

U12 Branch Point Sequence:

TATTTTTTAACA

Flanking Amino Acid:

SYGGLAFVQLMIQREAEVKN

Intron Amino Acid Position:

303

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

77.9

36.8

Major BPS

0.3

62.3

30.4

Major PPT

84.4

0.77

0.9

81.3

34.8

Minor 5ss

36.4

-1.5

3.3

46.1

43.6

Minor BPS

81.2

0.98

83.95

29.4

Associated Gene:

Gene:

FAM172A

Ensembl Gene ID:

ENSAPLG00000004055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004180

79206564 - 79452504

245941