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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_79389641_79452361_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

79389641 - 79452361

Intron Length:

62721

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTCGC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGGTCAC

U12 Branch Point Sequence:

CCCCCGGTCACT

Flanking Amino Acid:

MLPDCPRVSAGTERHELTSW

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

67.1

44.6

Major BPS

-0

1.3

52.4

43.3

Major PPT

81.9

0.72

0.8

76.3

32.3

Minor 5ss

33.2

-1.9

3.1

44.2

43.6

Minor BPS

36.7

-0.9

2.7

52.05

48.7

Associated Gene:

Gene:

FAM172A

Ensembl Gene ID:

ENSAPLG00000004055

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004180

79206564 - 79452504

245941