Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_794468_794569_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

794468 - 794569

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCGGC

5'SS Class:

major

3'SS Sequence:

TCCCGCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGACAT

U12 Branch Point Sequence:

CGTGCCTGACAT

Flanking Amino Acid:

RPVIHRSWSVVETVNLSEVI

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

63.2

41.8

Major BPS

55.3

0.13

1.3

64.4

41.8

Major PPT

0.34

56.5

38.8

Minor 5ss

36.8

-1.5

3.4

46.9

Minor BPS

46.1

-0.2

1.9

62.72

46.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041265

793239 - 806728

13490

ENSAPLT00000019602

793239 - 807875

14637

ENSAPLT00000005506

793239 - 817430

24192