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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_796418_796545_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

796418 - 796545

Intron Length:

128

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGC|GTGAGTAGT

5'SS Class:

major

3'SS Sequence:

CCGCGGGCTCCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGCTGAC

U12 Branch Point Sequence:

TGACCGTCACCT

Flanking Amino Acid:

LLHTVSLRLGHLPGVPFVSC

Intron Amino Acid Position:

242

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.3

68.8

43.8

Major BPS

53.9

0.1

1.2

46.4

38.9

Major PPT

57.5

0.17

45.5

41.4

Minor 5ss

32.9

-1.9

2.8

37.9

Minor BPS

43.1

-0.4

2.4

63.66

45.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005326

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041265

793239 - 806728

13490

ENSAPLT00000019602

793239 - 807875

14637

ENSAPLT00000005506

793239 - 817430

24192