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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_79952293_79953434_R

Intron Information:

Intron Rank:

137125

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

79952293 - 79953434

Intron Length:

1142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGGCA

5'SS Class:

major

3'SS Sequence:

CAAATGAGCACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCAAAT

U12 Branch Point Sequence:

TCCTCTCCAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.9

0.49

1.1

61.2

37.2

Major BPS

64.7

0.37

1.1

69.5

34.1

Major PPT

50.8

0.02

1.1

42.5

41.5

Minor 5ss

35.7

-1.6

3.5

47.9

47.7

Minor BPS

47.1

-0.1

65.9

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021272

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017448

79951690 - 79965978

14289