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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_80461821_80462249_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
80461821 - 80462249

Intron Length:
429

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTACGTTGG

5'SS Class:
major

3'SS Sequence:
TTCCTCTCTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
TAATCATACACC

Flanking Amino Acid:
SIIRVEYSLMVYVDIPGAMD

Intron Amino Acid Position:
291

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.5
0.62
1.1
62.6
44.4

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
86.5
0.82
0.7
84.7
23.1

Minor 5ss
38.7
-1.3
3
46.5
44.1

Minor BPS
46
-0.3
2.3
61.72
43.1

Associated Gene:

Gene:
ARRDC3

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

80454247 - 80464954
10708