Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_80707977_80708678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80707977 - 80708678

Intron Length:

702

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTATT

5'SS Class:

major

3'SS Sequence:

CTCTCTTTCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTAAAC

Flanking Amino Acid:

GVKRVPISSQAFLLPGLNFT

Intron Amino Acid Position:

4867

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.3

83.5

35.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

71.9

0.49

73.3

29.1

Minor 5ss

43.2

-0.7

2.6

60.2

44.3

Minor BPS

70.3

0.62

1.5

80.76

33.2

Associated Gene:

Gene:

ADGRV1

Ensembl Gene ID:

ENSAPLG00000008200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008578

80535623 - 80807079

271457