Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_80722792_80723485_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80722792 - 80723485

Intron Length:

694

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATTCACT

5'SS Class:

major

3'SS Sequence:

TGTTTTTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATAAAT

U12 Branch Point Sequence:

TTGTTTTTGTTT

Flanking Amino Acid:

SGNLTFADGQAVGEIEITII

Intron Amino Acid Position:

4020

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

69.9

40.2

Major BPS

74.5

0.61

79.6

29.1

Major PPT

84.1

0.77

0.8

77.2

37.1

Minor 5ss

48.2

-0.2

2.5

67.7

42.9

Minor BPS

-0.3

3.4

73.17

Associated Gene:

Gene:

ADGRV1

Ensembl Gene ID:

ENSAPLG00000008200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008578

80535623 - 80807079

271457