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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_80738995_80742928_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

80738995 - 80742928

Intron Length:

3934

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAA|GCTTGGTAA

5'SS Class:

weak_major

3'SS Sequence:

AATCATATTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

CTTTTCTGAATA

Flanking Amino Acid:

IMNHSTSSPPKKHHCSAMVN

Intron Amino Acid Position:

2740

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.2

0.17

1.4

50.3

36.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

72.2

0.5

67.3

42.5

Minor 5ss

29.9

-2.3

38.5

41.2

Minor BPS

68.8

0.59

1.4

75.52

36.2

Associated Gene:

Gene:

ADGRV1

Ensembl Gene ID:

ENSAPLG00000008200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023434

80738928 - 80801547

62620