Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_80752908_80753643_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80752908 - 80753643

Intron Length:

736

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTATA

5'SS Class:

major

3'SS Sequence:

TAATCTCTTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TTTATTATAATC

Flanking Amino Acid:

NLLANITVRRSEGRFGQLQI

Intron Amino Acid Position:

2431

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

80.9

32.8

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

76.8

0.6

0.8

74.5

35.8

Minor 5ss

41.8

-0.9

2.5

51.7

44.8

Minor BPS

58.2

0.24

1.6

71.33

33.8

Associated Gene:

Gene:

ADGRV1

Ensembl Gene ID:

ENSAPLG00000008200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023434

80738928 - 80801547

62620

ENSAPLT00000008578

80535623 - 80807079

271457