Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_80753826_80754055_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80753826 - 80754055

Intron Length:

230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTTGAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCATTAT

U12 Branch Point Sequence:

GCTGCATTATTT

Flanking Amino Acid:

LADDVPEIEEIVRVELTQAS

Intron Amino Acid Position:

2371

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

33.6

Major BPS

54.4

0.11

1.4

45.4

Major PPT

68.1

0.41

1.7

80.8

31.2

Minor 5ss

35.2

-1.7

2.9

41.4

39.1

Minor BPS

48.1

-0

65.47

45.3

Associated Gene:

Gene:

ADGRV1

Ensembl Gene ID:

ENSAPLG00000008200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023434

80738928 - 80801547

62620

ENSAPLT00000008578

80535623 - 80807079

271457