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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_80778644_80779286_R

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

80778644 - 80779286

Intron Length:

643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAACACT

5'SS Class:

strong_major

3'SS Sequence:

GGTACCTGAAGAG|G

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

ATTGTCTTAATA

Flanking Amino Acid:

NITIYSLPDEEEVFTISLFN

Intron Amino Acid Position:

1028

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

77.8

36.9

Major BPS

0.92

0.9

86.2

29.1

Major PPT

44.1

-0.3

1.7

42.1

Minor 5ss

41.4

-1

58.6

45.7

Minor BPS

72.5

0.7

1.3

76.94

34.3

Associated Gene:

Gene:

ADGRV1

Ensembl Gene ID:

ENSAPLG00000008200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023434

80738928 - 80801547

62620

ENSAPLT00000008578

80535623 - 80807079

271457