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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_80797442_80799858_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80797442 - 80799858

Intron Length:

2417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAACA

5'SS Class:

strong_major

3'SS Sequence:

ATTATTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATTAT

U12 Branch Point Sequence:

CTACTATTATTT

Flanking Amino Acid:

IYNLTVLDDQIPENDELFVV

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

74.4

Major BPS

72.4

0.56

1.1

63.7

42.3

Major PPT

85.7

0.8

77.5

Minor 5ss

32.4

-2

3.1

40.9

45.1

Minor BPS

46.7

-0.1

1.8

62.89

41.5

Associated Gene:

Gene:

ADGRV1

Ensembl Gene ID:

ENSAPLG00000008200

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033971

80781199 - 80810901

29703

ENSAPLT00000023434

80738928 - 80801547

62620

ENSAPLT00000008578

80535623 - 80807079

271457