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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_80833880_80835030_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

80833880 - 80835030

Intron Length:

1151

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTATTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

CTTACTTAAACT

Flanking Amino Acid:

NAIALQFCCSVADIKRVNNL

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

0.9

68.7

38.1

Major BPS

90.4

0.7

90.2

19.3

Major PPT

83.6

0.76

0.8

82.1

34.6

Minor 5ss

27.1

-2.6

31.9

42.5

Minor BPS

63.7

0.51

1.7

80.13

42.2

Associated Gene:

Gene:

LYSMD3

Ensembl Gene ID:

ENSAPLG00000001247

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001235

80833508 - 80835684

2177