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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_80860531_80872903_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

80860531 - 80872903

Intron Length:

12373

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGAC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTTGTATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAGTAAT

U12 Branch Point Sequence:

TTACACTGAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.6

0.84

0.9

78.6

28.8

Major BPS

64.3

0.36

1.2

65.3

38.6

Major PPT

79.5

0.66

0.8

32.6

Minor 5ss

34.7

-1.7

3.2

43.7

38.1

Minor BPS

58.9

0.36

1.6

76.93

38.9

Associated Gene:

Gene:

CETN3

Ensembl Gene ID:

ENSAPLG00000008041

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032577

80860373 - 80885054

24682