Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_81245042_81245228_F

Intron Information:

Intron Rank:

143836

Intron Class:

major

Intron Phase:

Intron Coordinates:

81245042 - 81245228

Intron Length:

187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATATTT

5'SS Class:

strong_major

3'SS Sequence:

GTTCTTCATTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

CTGTTCTTCATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

83.5

28.8

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

80.1

0.68

0.9

77.9

35.5

Minor 5ss

43.9

-0.7

3.1

65.3

45.8

Minor BPS

59.6

0.38

1.8

74.52

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027515

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028549

81244669 - 81247089

2421