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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_81392878_81402015_F

Intron Information:

Intron Rank:

145424

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

81392878 - 81402015

Intron Length:

9138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTCAGCCCC

5'SS Class:

weak_major

3'SS Sequence:

TTTGTTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAATCAT

U12 Branch Point Sequence:

TGACAATCATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.3

0.06

1.4

46.4

40.3

Major BPS

68.1

0.45

1.1

69.7

35.6

Major PPT

89.5

0.89

0.7

29.8

Minor 5ss

35.8

-1.6

2.9

40.9

38.7

Minor BPS

40.8

-0.6

58.57

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037174

81350001 - 81403299

53299