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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_81434639_81437973_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

81434639 - 81437973

Intron Length:

3335

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGATTT

5'SS Class:

major

3'SS Sequence:

TTAAACATCCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TGCTTTTAAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

75.4

34.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

54.3

0.1

1.1

50.3

42.4

Minor 5ss

46.3

-0.4

2.8

65.6

45.6

Minor BPS

58.2

0.26

1.7

66.82

40.3

Associated Gene:

Gene:

MEF2C

Ensembl Gene ID:

ENSAPLG00000011196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022141

81434509 - 81564406

129898

ENSAPLT00000034414

81434509 - 81564495

129987

ENSAPLT00000031189

81434509 - 81564495

129987