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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_81438073_81489783_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

81438073 - 81489783

Intron Length:

51711

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTGTGTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TAATATTTGATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.85

0.8

83.1

28.6

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

77.7

0.62

0.9

77.1

37.1

Minor 5ss

33.3

-1.9

3.4

45.9

43.7

Minor BPS

59.7

0.39

1.5

73.35

37.5

Associated Gene:

Gene:

MEF2C

Ensembl Gene ID:

ENSAPLG00000011196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031189

81434509 - 81564495

129987

ENSAPLT00000022141

81434509 - 81564406

129898