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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_81458986_81489783_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

81458986 - 81489783

Intron Length:

30798

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTATGAGTC

5'SS Class:

major

3'SS Sequence:

TTTCTGTGTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TAATATTTGATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.61

67.8

35.7

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

77.7

0.62

0.9

77.1

37.1

Minor 5ss

41.2

-1

3.4

55.6

43.4

Minor BPS

59.7

0.39

1.5

73.35

37.5

Associated Gene:

Gene:

MEF2C

Ensembl Gene ID:

ENSAPLG00000011196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011671

81458897 - 81563753

104857