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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_81529996_81537490_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

81529996 - 81537490

Intron Length:

7495

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

TTTGCTTGTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTACTAT

U12 Branch Point Sequence:

TTTGCTTGTACA

Flanking Amino Acid:

DLMISRQRLCAVPPPNFEMP

Intron Amino Acid Position:

135

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

83.8

34.5

Major BPS

47.7

-0.1

1.5

46.8

46.3

Major PPT

0.7

0.9

Minor 5ss

43.7

-0.7

2.9

61.3

Minor BPS

53.8

0.11

1.9

71.77

40.2

Associated Gene:

Gene:

MEF2C

Ensembl Gene ID:

ENSAPLG00000011196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028933

81448027 - 81563772

115746

ENSAPLT00000025638

81489784 - 81564406

74623

ENSAPLT00000011671

81458897 - 81563753

104857