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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_81537678_81538795_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

81537678 - 81538795

Intron Length:

1118

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGCTCT

5'SS Class:

strong_major

3'SS Sequence:

TTCAACCTCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

TTCATTTCAACC

Flanking Amino Acid:

THRPPSAGNTGGLMGGDLTT

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

72.3

40.1

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

67.4

0.39

0.9

58.6

37.9

Minor 5ss

45.1

-0.5

3.2

65.3

46.1

Minor BPS

56.7

0.19

1.6

66.56

39.4

Associated Gene:

Gene:

MEF2C

Ensembl Gene ID:

ENSAPLG00000011196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025638

81489784 - 81564406

74623

ENSAPLT00000022141

81434509 - 81564406

129898

ENSAPLT00000034414

81434509 - 81564495

129987

ENSAPLT00000011671

81458897 - 81563753

104857

ENSAPLT00000031189

81434509 - 81564495

129987

ENSAPLT00000028933

81448027 - 81563772

115746