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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_81556709_81563527_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

81556709 - 81563527

Intron Length:

6819

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCCTCCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCAACAT

U12 Branch Point Sequence:

AAAGCCTCAACA

Flanking Amino Acid:

NMPPSALSQLGDRTTTPSRY

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

72.7

44.5

Major BPS

58.4

0.21

1.2

65.6

39.7

Major PPT

80.6

0.69

0.7

73.9

31.2

Minor 5ss

40.7

-1

2.9

49.5

46.5

Minor BPS

0.25

1.7

64.65

41.1

Associated Gene:

Gene:

MEF2C

Ensembl Gene ID:

ENSAPLG00000011196

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000028933

81448027 - 81563772

115746

ENSAPLT00000025638

81489784 - 81564406

74623

ENSAPLT00000011671

81458897 - 81563753

104857