Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_81928391_81929374_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

81928391 - 81929374

Intron Length:

984

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTTTTGGTC

5'SS Class:

weak_major

3'SS Sequence:

CAGCCCGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCCCAT

U12 Branch Point Sequence:

CCATCCACAGCT

Flanking Amino Acid:

NSSPAERNLGRDSTMATEAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

50.3

0.01

1.2

48.8

40.1

Major BPS

59.7

0.24

1.3

68.6

38.9

Major PPT

62.6

0.28

54.1

36.2

Minor 5ss

35.9

-1.6

3.5

42.6

44.7

Minor BPS

45.3

-0.2

62.19

47.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030736

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031333

81928313 - 81929575

1263