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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82019360_82022916_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82019360 - 82022916

Intron Length:

3557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTAATATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTGTTTTTAATA

Flanking Amino Acid:

FKPAMPRSVVGTACMYFKRF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

65.4

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

75.4

0.57

0.9

70.7

Minor 5ss

38.9

-1.2

2.8

45.7

43.7

Minor BPS

75.5

0.8

1.1

78.11

Associated Gene:

Gene:

CCNH

Ensembl Gene ID:

ENSAPLG00000005729

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005938

82018997 - 82031828

12832