Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82037688_82038877_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

82037688 - 82038877

Intron Length:

1190

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

TTAAAATTGCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTGTTTTAATG

Flanking Amino Acid:

LANLVEFGAKEPYMEGVNPF

Intron Amino Acid Position:

895

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

93.3

21.1

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

59.1

0.21

1.1

51.8

46.6

Minor 5ss

-1

59.7

44.8

Minor BPS

67.4

0.41

1.4

69.97

38.4

Associated Gene:

Gene:

RASA1

Ensembl Gene ID:

ENSAPLG00000005627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005866

82034604 - 82092371

57768