Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82058612_82060340_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82058612 - 82060340

Intron Length:

1729

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTTTCTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

ACTATATTAACT

Flanking Amino Acid:

IVKKGYLLKKSKGKRWKNLY

Intron Amino Acid Position:

430

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

80.3

27.7

Major BPS

81.9

0.79

0.8

81.9

Major PPT

85.2

0.79

0.8

79.9

32.3

Minor 5ss

39.1

-1.2

2.9

50.9

39.6

Minor BPS

61.5

0.44

1.6

76.04

40.3

Associated Gene:

Gene:

RASA1

Ensembl Gene ID:

ENSAPLG00000005627

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000005866

82034604 - 82092371

57768