Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82226491_82228688_R

Intron Information:

Intron Rank:

130152

Intron Class:

major

Intron Phase:

Intron Coordinates:

82226491 - 82228688

Intron Length:

2198

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAACAAAA

5'SS Class:

major

3'SS Sequence:

TGCTTGTTCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAT

U12 Branch Point Sequence:

TTATCCCTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.7

0.46

1.2

67.8

39.3

Major BPS

81.9

0.79

0.9

80.1

Major PPT

76.7

0.6

0.9

68.4

42.1

Minor 5ss

37.9

-1.4

2.9

40.7

45.3

Minor BPS

75.4

0.78

1.6

84.56

33.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017225

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024895

82226045 - 82229999

3955