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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82278973_82280008_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

82278973 - 82280008

Intron Length:

1036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAACTATC

5'SS Class:

major

3'SS Sequence:

CATTTTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

GAGTCCTTAAAC

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.3

0.6

1.2

76.2

39.9

Major BPS

84.4

0.85

34.5

Major PPT

86.3

0.82

0.8

80.9

30.7

Minor 5ss

45.4

-0.5

2.6

55.1

42.4

Minor BPS

69.7

0.6

1.4

70.14

40.5

Associated Gene:

Gene:

COX7C

Ensembl Gene ID:

ENSAPLG00000024728

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039768

82278861 - 82281532

2672