Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82296033_82298753_F

Intron Information:

Intron Rank:

125775

Intron Class:

major

Intron Phase:

Intron Coordinates:

82296033 - 82298753

Intron Length:

2721

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATACAG

U12 Branch Point Sequence:

TTTCTTTTCACA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

35.3

Major BPS

45.5

-0.2

1.5

56.4

39.5

Major PPT

90.8

0.92

0.6

87.1

23.5

Minor 5ss

36.1

-1.6

3.3

49.5

41.2

Minor BPS

61.7

0.36

1.7

75.92

35.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017741

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021964

82290493 - 82298980

8488