Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82507771_82507857_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82507771 - 82507857

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTGAGTTCA

5'SS Class:

major

3'SS Sequence:

TTGTCCATTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTCCAT

U12 Branch Point Sequence:

TGTTTGTCCATT

Flanking Amino Acid:

MISVVQKRESHDY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

67.1

34.3

Major BPS

62.1

0.3

1.4

72.5

43.5

Major PPT

80.3

0.68

0.9

74.4

Minor 5ss

37.9

-1.4

2.9

51.5

44.9

Minor BPS

43.4

-0.4

2.5

68.05

43.4

Associated Gene:

Gene:

FRMPD1

Ensembl Gene ID:

ENSAPLG00000014290

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014891

82507762 - 82517281

9520