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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82510130_82511392_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
82510130 - 82511392

Intron Length:
1263

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ATG|GTATGAGTG

5'SS Class:
major

3'SS Sequence:
TCTCTCCCTACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TAAAGAT

U12 Branch Point Sequence:
AAAGATTCAACC

Flanking Amino Acid:
NGKIFNATLMLQDRESYVAL

Intron Amino Acid Position:
193

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.1
0.59
1
64.3
40

Major BPS
59.6
0.24
1.1
55.4
40.4

Major PPT
83
0.74
0.7
76.7
25.5

Minor 5ss
40.3
-1.1
3.4
52.3
45.9

Minor BPS
46
-0.3
1.7
52.31
38.4

Associated Gene:

Gene:
FRMPD1

Ensembl Gene ID:

Chromosome:
Z

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

82507762 - 82517281
9520

82507762 - 82517281
9520

82507762 - 82517281
9520