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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82550726_82558787_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82550726 - 82558787

Intron Length:

8062

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTTGATGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CTCTTTTTGATG

Flanking Amino Acid:

LQNDMKLHESKKRGLRYTTI

Intron Amino Acid Position:

453

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.74

0.9

76.8

33.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.3

0.7

0.9

77.1

36.2

Minor 5ss

32.2

-2

41.4

39.1

Minor BPS

56.3

0.05

1.3

56.54

40.4

Associated Gene:

Gene:

POLR1E

Ensembl Gene ID:

ENSAPLG00000010340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010769

82550614 - 82574042

23429