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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82562819_82564940_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

82562819 - 82564940

Intron Length:

2122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTATCTTTT

5'SS Class:

strong_minor

3'SS Sequence:

AAAATCCTTCCAG|T

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

ATTTCTTTAAAA

Flanking Amino Acid:

KPEHVYKFEDILSPAEFEAL

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.19

1.2

65.5

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

0.38

55.7

44.5

Minor 5ss

84.8

1.17

1.4

89.4

22.9

Minor BPS

78.2

0.88

1.2

83.16

30.4

Associated Gene:

Gene:

POLR1E

Ensembl Gene ID:

ENSAPLG00000010340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010769

82550614 - 82574042

23429