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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82565049_82566298_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82565049 - 82566298

Intron Length:

1250

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAATG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTCTCCTAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTAAAT

U12 Branch Point Sequence:

TGTTTCCTACTT

Flanking Amino Acid:

ANVIDAKGVTALIQDVAQDD

Intron Amino Acid Position:

269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.6

0.8

84.6

33.3

Major BPS

69.8

0.49

1.1

75.5

35.2

Major PPT

70.9

0.47

75.3

27.2

Minor 5ss

37.1

-1.5

48.5

47.2

Minor BPS

53.9

0.2

1.9

76.83

Associated Gene:

Gene:

POLR1E

Ensembl Gene ID:

ENSAPLG00000010340

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010769

82550614 - 82574042

23429