Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82658586_82659873_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82658586 - 82659873

Intron Length:

1288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACACAG

5'SS Class:

major

3'SS Sequence:

TTTGTCTCCCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTCAA

U12 Branch Point Sequence:

AAATGATAAATA

Flanking Amino Acid:

DWSISNKDLEAQICNYASVR

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

62.5

43.8

Major BPS

76.9

0.67

0.8

77.7

26.1

Major PPT

81.4

0.71

0.8

73.7

36.9

Minor 5ss

36.9

-1.5

3.1

47.4

Minor BPS

43.2

-0.5

2.1

52.98

39.1

Associated Gene:

Gene:

ZCCHC7

Ensembl Gene ID:

ENSAPLG00000010747

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011203

82621786 - 82735378

113593