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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82770825_82781707_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82770825 - 82781707

Intron Length:

10883

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGACTC

5'SS Class:

strong_major

3'SS Sequence:

CGGTCTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTCCTGCCTT

Flanking Amino Acid:

TYATPRAGRTGHGGVNQLGG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

69.9

41.1

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

72.6

0.51

68.8

Minor 5ss

35.1

-1.7

3.5

50.3

46.3

Minor BPS

43.4

-0.4

3.6

80.5

41.8

Associated Gene:

Gene:

PAX5

Ensembl Gene ID:

ENSAPLG00000010841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035436

82770779 - 82892244

121466

ENSAPLT00000021034

82770779 - 82900005

129227

ENSAPLT00000011283

82770779 - 82900005

129227