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Intron Name: Anas_platyrhynchos_platyrhynchos_Z_82781874_82786017_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

82781874 - 82786017

Intron Length:

4144

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGTG

5'SS Class:

strong_major

3'SS Sequence:

GATGTTGTCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTTGTGATAACT

Flanking Amino Acid:

SHGCVSKILGRYYETGSIKP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

76.9

38.6

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

67.5

0.39

57.7

47.1

Minor 5ss

32.8

-2

3.7

45.9

49.3

Minor BPS

49.8

0.07

2.4

80.09

42.1

Associated Gene:

Gene:

PAX5

Ensembl Gene ID:

ENSAPLG00000010841

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035436

82770779 - 82892244

121466

ENSAPLT00000021034

82770779 - 82900005

129227

ENSAPLT00000011283

82770779 - 82900005

129227